{
  "_id": "6ac7d363de46216d5edd342b",
  "Package": "MOObject",
  "Title": "multiOmicDataSet object class for MOSuite",
  "Version": "0.5.0.9000",
  "Authors@R": "c(\nperson(\"Kelly L\", \"Sovacool\", , \"kelly.sovacool@nih.gov\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-3283-829X\")),\nperson(\"Philip\", \"Homan\", , \"philip.homan@nih.gov\", role = \"aut\"),\nperson(\"Vishal\", \"Koparde\", , \"vishal.koparde@nih.gov\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-8978-8495\")),\nperson(\"CCR Collaborative Bioinformatics Resource\", role = \"cph\")\n)",
  "Description": "MOObject defines the multiOmicDataSet object class which\nis used in MOSuite for differential RNA-seq and multi-omics\nanalyses. Separating the MOObject class definition from MOSuite\nallows for lightweight installations in downstream workflows.\nSee the website for more information:\n<https://ccbr.github.io/MOObject/>. See the MOSuite website for\nthe most comprehensive documentation:\n<https://ccbr.github.io/MOSuite/>.",
  "License": "MIT + file LICENSE",
  "URL": "https://github.com/CCBR/MOObject, https://ccbr.github.io/MOObject/",
  "BugReports": "https://github.com/CCBR/MOObject/issues",
  "Encoding": "UTF-8",
  "Config/testthat/edition": "3",
  "Roxygen": "list(markdown = TRUE)",
  "Config/Needs/dev": "cffr, covr, here, lintr, pkgdown, rcmdcheck, xml2",
  "Config/roxygen2/version": "8.1.0",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "libx11-dev",
  "Repository": "https://kelly-sovacool.r-universe.dev",
  "Date/Publication": "2026-10-08 14:33:12 UTC",
  "RemoteUrl": "https://github.com/CCBR/MOObject",
  "RemoteRef": "HEAD",
  "RemoteSha": "36830c75bdddff99fc71ee4d0a2e908a41f42ab7",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-08 17:11:59 UTC",
    "User": "root"
  },
  "Author": "Kelly L Sovacool [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-3283-829X>),\nPhilip Homan [aut],\nVishal Koparde [aut] (ORCID: <https://orcid.org/0000-0001-8978-8495>),\nCCR Collaborative Bioinformatics Resource [cph]",
  "Maintainer": "Kelly L Sovacool <kelly.sovacool@nih.gov>",
  "_user": "kelly-sovacool",
  "_type": "src",
  "_file": "MOObject_0.5.0.9000.tar.gz",
  "_fileid": "https://r2.ropensci.org/95688272b75726e3d297ae4448b3b45b7c574662d609095c5570c3532943ddc5",
  "_filesize": 133161,
  "_sha256": "95688272b75726e3d297ae4448b3b45b7c574662d609095c5570c3532943ddc5",
  "_expires": "2027-01-16T17:31:13.000Z",
  "_created": "2026-10-08T17:11:59.000Z",
  "_published": "2026-10-08T17:31:15.739Z",
  "_buildurl": "https://github.com/r-universe/kelly-sovacool/actions/runs/37814337335",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_jobs": [
    {
      "job": 113440321725,
      "time": 112,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11565754790"
    },
    {
      "job": 113440321830,
      "time": 151,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11566697465"
    },
    {
      "job": 113440322394,
      "time": 98,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11566594858"
    },
    {
      "job": 113440322024,
      "time": 94,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11566594116"
    },
    {
      "job": 113439089281,
      "time": 162,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11566237938"
    },
    {
      "job": 113440321752,
      "time": 122,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "11566238246"
    },
    {
      "job": 113440322018,
      "time": 92,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11566861929"
    },
    {
      "job": 113440321989,
      "time": 96,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11567195492"
    },
    {
      "job": 113440321837,
      "time": 63,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11566358074"
    }
  ],
  "_upstream": "https://github.com/CCBR/MOObject",
  "_commit": {
    "id": "36830c75bdddff99fc71ee4d0a2e908a41f42ab7",
    "author": "Kelly Sovacool <kelly.sovacool@nih.gov>",
    "committer": "Kelly Sovacool <kelly.sovacool@nih.gov>",
    "message": "ci: authenticate ccbr-bot with client-id\n\nReplace the legacy `app-id` input with `client-id` and swap\n`vars.CCBR_BOT_APP_ID` for `vars.CCBR_BOT_CLIENT_ID`. This requires\nbumping `actions/create-github-app-token` to v3, since the `client-id`\ninput is not available in v2.\n\nAlso adds the shared `pre-review-pr` workflow from CCBR/actions\nexamples, which supersedes the standalone `review-pre-commit-pr`\nworkflow.\n\n_AI assistance: Claude Opus 5 via Copilot in VS Code_\n",
    "time": 1791469992
  },
  "_maintainer": {
    "name": "Kelly L Sovacool",
    "email": "kelly.sovacool@nih.gov",
    "login": "kelly-sovacool",
    "mastodon": "@kelly_sovacool@mastodon.social",
    "bluesky": "@kelly.sova.cool",
    "linkedin": "in/kelly-sovacool",
    "orcid": "0000-0003-3283-829X",
    "description": "Bioinformatics Software Engineer",
    "uuid": 17768269
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "glue",
      "role": "Imports"
    },
    {
      "package": "readr",
      "role": "Imports"
    },
    {
      "package": "S7",
      "role": "Imports"
    },
    {
      "package": "cffr",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "roxygen2",
      "version": ">= 8.0.0",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "usethis",
      "role": "Suggests"
    },
    {
      "package": "withr",
      "role": "Suggests"
    }
  ],
  "_owner": "ccbr",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-35",
      "n": 2
    },
    {
      "week": "2026-36",
      "n": 16
    },
    {
      "week": "2026-39",
      "n": 2
    },
    {
      "week": "2026-41",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "v0.5.0",
      "date": "2026-09-02"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "kelly-sovacool",
      "count": 35,
      "uuid": 17768269
    },
    {
      "user": "copilot",
      "count": 1,
      "uuid": 198982749
    }
  ],
  "_userbio": {
    "uuid": 17768269,
    "type": "user",
    "name": "Kelly Sovacool, PhD",
    "followers": 120,
    "description": "Bioinformatics Software Engineer"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/MOObject"
  },
  "_devurl": "https://github.com/ccbr/moobject",
  "_pkgdown": "https://ccbr.github.io/MOObject/",
  "_searchresults": 4,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/MOObject.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "LICENSE"
  ],
  "_cranurl": false,
  "_exports": [
    "create_multiOmicDataSet_from_dataframes",
    "create_multiOmicDataSet_from_files",
    "extract_counts",
    "multiOmicDataSet",
    "read_multiOmicDataSet",
    "read_multiOmicDataSet_properties",
    "write_multiOmicDataSet",
    "write_multiOmicDataSet_properties"
  ],
  "_help": [
    {
      "page": "create_multiOmicDataSet_from_dataframes",
      "title": "Construct a multiOmicDataSet object from data frames",
      "concept": [
        "moo"
      ],
      "topics": [
        "create_multiOmicDataSet_from_dataframes"
      ]
    },
    {
      "page": "create_multiOmicDataSet_from_files",
      "title": "Construct a multiOmicDataSet object from text files (e.g. TSV, CSV).",
      "concept": [
        "moo"
      ],
      "topics": [
        "create_multiOmicDataSet_from_files"
      ]
    },
    {
      "page": "extract_counts",
      "title": "Extract count data",
      "concept": [
        "moo"
      ],
      "topics": [
        "extract_counts",
        "extract_counts,MOObject::multiOmicDataSet-method"
      ]
    },
    {
      "page": "multiOmicDataSet",
      "title": "multiOmicDataSet class",
      "concept": [
        "moo"
      ],
      "topics": [
        "multiOmicDataSet"
      ]
    },
    {
      "page": "read_multiOmicDataSet",
      "title": "Read a multiOmicDataSet from RDS",
      "concept": [
        "moo"
      ],
      "topics": [
        "read_multiOmicDataSet"
      ]
    },
    {
      "page": "read_multiOmicDataSet_properties",
      "title": "Read multiOmicDataSet properties from individual files.",
      "concept": [
        "moo"
      ],
      "topics": [
        "read_multiOmicDataSet_properties"
      ]
    },
    {
      "page": "write_multiOmicDataSet",
      "title": "Write a multiOmicDataSet to RDS",
      "concept": [
        "moo"
      ],
      "topics": [
        "write_multiOmicDataSet"
      ]
    },
    {
      "page": "write_multiOmicDataSet_properties",
      "title": "Write multiOmicDataSet properties to individual files.",
      "concept": [
        "moo"
      ],
      "topics": [
        "write_multiOmicDataSet_properties",
        "write_multiOmicDataSet_properties,MOObject::multiOmicDataSet-method"
      ]
    }
  ],
  "_readme": "https://github.com/CCBR/MOObject/raw/HEAD/README.md",
  "_rundeps": [
    "bit",
    "bit64",
    "cli",
    "clipr",
    "cpp11",
    "crayon",
    "glue",
    "hms",
    "lifecycle",
    "magrittr",
    "pillar",
    "pkgconfig",
    "prettyunits",
    "progress",
    "R6",
    "readr",
    "rlang",
    "S7",
    "tibble",
    "tidyselect",
    "tzdb",
    "utf8",
    "vctrs",
    "vroom",
    "withr"
  ],
  "_score": 2.3010299956639813,
  "_indexed": false,
  "_nocasepkg": "moobject",
  "_universes": [
    "kelly-sovacool"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.5.0.9000",
      "date": "2026-10-08T17:13:58.000Z",
      "distro": "resolute",
      "commit": "36830c75bdddff99fc71ee4d0a2e908a41f42ab7",
      "fileid": "https://r2.ropensci.org/cc93d40111179bd5c1acf194a2d7ea7363374be0ef9ae33b8e11a03b3134f07d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kelly-sovacool/actions/runs/37814337335"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.5.0.9000",
      "date": "2026-10-08T17:14:35.000Z",
      "distro": "resolute",
      "commit": "36830c75bdddff99fc71ee4d0a2e908a41f42ab7",
      "fileid": "https://r2.ropensci.org/663e893c9899e16b56b8d601e5f7ff28c12ab3833d24a222c9c6a6b404d55c8b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kelly-sovacool/actions/runs/37814337335"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.5.0.9000",
      "date": "2026-10-08T17:30:45.000Z",
      "commit": "36830c75bdddff99fc71ee4d0a2e908a41f42ab7",
      "fileid": "https://r2.ropensci.org/022e5d2a8ad67d4f83c85ee192997bd09907dd56db948dd8686d79d82579cdf6",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kelly-sovacool/actions/runs/37814337335"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.5.0.9000",
      "date": "2026-10-08T17:25:52.000Z",
      "commit": "36830c75bdddff99fc71ee4d0a2e908a41f42ab7",
      "fileid": "https://r2.ropensci.org/429f1f042107e016e386b158f1195b27d76530d7c32ff751b2b9e17d657ec730",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kelly-sovacool/actions/runs/37814337335"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.5.0.9000",
      "date": "2026-10-08T17:14:16.000Z",
      "commit": "36830c75bdddff99fc71ee4d0a2e908a41f42ab7",
      "fileid": "https://r2.ropensci.org/8771c19c3ca6e3de020d6e1d408efbc9b08403f9125ee716b39931e4cc0a58f8",
      "status": "success",
      "buildurl": "https://github.com/r-universe/kelly-sovacool/actions/runs/37814337335"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.5.0.9000",
      "date": "2026-10-08T17:13:25.000Z",
      "commit": "36830c75bdddff99fc71ee4d0a2e908a41f42ab7",
      "fileid": "https://r2.ropensci.org/6dc140622319e558f24e459892b3de3870b12a5b6d1d4e0f074910d4a873870d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kelly-sovacool/actions/runs/37814337335"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.5.0.9000",
      "date": "2026-10-08T17:13:34.000Z",
      "commit": "36830c75bdddff99fc71ee4d0a2e908a41f42ab7",
      "fileid": "https://r2.ropensci.org/8e67c407399dc2f169d291e0dcc6200ee20c4764a0f2c993a1b2aa0b82d7c603",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kelly-sovacool/actions/runs/37814337335"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.5.0.9000",
      "date": "2026-10-08T17:13:03.000Z",
      "commit": "36830c75bdddff99fc71ee4d0a2e908a41f42ab7",
      "fileid": "https://r2.ropensci.org/55eddebed2e8a7b9396e72c5054bb973a75fbc024638937f19e3cc17792987ae",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kelly-sovacool/actions/runs/37814337335"
    }
  ]
}