1. mikropml::otu_data_preproc
    Mini OTU abundance dataset - preprocessed
    json| rda| rds
    list
  2. mikropml::otu_mini_bin
    Mini OTU abundance dataset
    csv| xlsx| json| ndjson| rda| rds
    data.frame|200 x 11
  3. mikropml::otu_mini_bin_results_glmnet
    Results from running the pipeline with L2 logistic regression on 'otu_mini_bin' with feature importance and grouping
    rda| rds
    list
  4. mikropml::otu_mini_bin_results_rf
    Results from running the pipeline with random forest on 'otu_mini_bin'
    rda| rds
    list
  5. mikropml::otu_mini_bin_results_rpart2
    Results from running the pipeline with rpart2 on 'otu_mini_bin'
    rda| rds
    list
  6. mikropml::otu_mini_bin_results_svmRadial
    Results from running the pipeline with svmRadial on 'otu_mini_bin'
    rda| rds
    list
  7. mikropml::otu_mini_bin_results_xgbTree
    Results from running the pipeline with xbgTree on 'otu_mini_bin'
    rda| rds
    list
  8. mikropml::otu_mini_cont_results_glmnet
    Results from running the pipeline with glmnet on 'otu_mini_bin' with 'Otu00001' as the outcome
    rda| rds
    list
  9. mikropml::otu_mini_cont_results_nocv
    Results from running the pipeline with glmnet on 'otu_mini_bin' with 'Otu00001' as the outcome column, using a custom train control scheme that does not perform cross-validation
    rda| rds
    list
  10. mikropml::otu_mini_cv
    Cross validation on 'train_data_mini' with grouped features.
    json| rda| rds
    list
  11. mikropml::otu_mini_multi
    Mini OTU abundance dataset with 3 categorical variables
    csv| xlsx| json| ndjson| rda| rds
    data.frame|490 x 11
  12. mikropml::otu_mini_multi_group
    Groups for otu_mini_multi
    json| rda| rds
    character
  13. mikropml::otu_mini_multi_results_glmnet
    Results from running the pipeline with glmnet on 'otu_mini_multi' for multiclass outcomes
    rda| rds
    list
  14. mikropml::otu_small
    Small OTU abundance dataset
    csv| xlsx| json| ndjson| rda| rds
    data.frame|200 x 61
  15. mikropml::otu_data_preproc
    Mini OTU abundance dataset - preprocessed
    json| rda| rds
    list
  16. mikropml::otu_mini_bin
    Mini OTU abundance dataset
    csv| xlsx| json| ndjson| rda| rds
    data.frame|200 x 11
  17. mikropml::otu_mini_bin_results_glmnet
    Results from running the pipeline with L2 logistic regression on 'otu_mini_bin' with feature importance and grouping
    rda| rds
    list
  18. mikropml::otu_mini_bin_results_rf
    Results from running the pipeline with random forest on 'otu_mini_bin'
    rda| rds
    list
  19. mikropml::otu_mini_bin_results_rpart2
    Results from running the pipeline with rpart2 on 'otu_mini_bin'
    rda| rds
    list
  20. mikropml::otu_mini_bin_results_svmRadial
    Results from running the pipeline with svmRadial on 'otu_mini_bin'
    rda| rds
    list
  21. mikropml::otu_mini_bin_results_xgbTree
    Results from running the pipeline with xbgTree on 'otu_mini_bin'
    rda| rds
    list
  22. mikropml::otu_mini_cont_results_glmnet
    Results from running the pipeline with glmnet on 'otu_mini_bin' with 'Otu00001' as the outcome
    rda| rds
    list
  23. mikropml::otu_mini_cont_results_nocv
    Results from running the pipeline with glmnet on 'otu_mini_bin' with 'Otu00001' as the outcome column, using a custom train control scheme that does not perform cross-validation
    rda| rds
    list
  24. mikropml::otu_mini_cv
    Cross validation on 'train_data_mini' with grouped features.
    json| rda| rds
    list
  25. mikropml::otu_mini_multi
    Mini OTU abundance dataset with 3 categorical variables
    csv| xlsx| json| ndjson| rda| rds
    data.frame|490 x 11
  26. mikropml::otu_mini_multi_group
    Groups for otu_mini_multi
    json| rda| rds
    character
  27. mikropml::otu_mini_multi_results_glmnet
    Results from running the pipeline with glmnet on 'otu_mini_multi' for multiclass outcomes
    rda| rds
    list
  28. mikropml::otu_small
    Small OTU abundance dataset
    csv| xlsx| json| ndjson| rda| rds
    data.frame|200 x 61